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High-Protein Deep-Dish Pizza Cupcakes

Here’s a complete high-protein Deep-Dish Pizza Cupcakes recipe that’s indulgent, savory, and packed with protein. These are perfect as a snack, meal prep, or a fun party treat.


High-Protein Deep-Dish Pizza Cupcakes

Ingredients

For the “Crust”:

  • 1 cup almond flour (or whole wheat flour if you prefer)
  • 1/4 cup unflavored or savory protein powder (whey or plant-based)
  • 1 tsp baking powder
  • 1/2 tsp garlic powder
  • 1/2 tsp onion powder
  • 1/4 tsp salt
  • 1 large egg
  • 2 tbsp olive oil
  • 2–3 tbsp unsweetened almond milk (adjust for consistency)

For the Filling:

  • 1/2 cup low-sodium marinara sauce
  • 1 cup shredded part-skim mozzarella cheese
  • 1/2 cup cooked lean protein (diced chicken breast, turkey pepperoni, or lean sausage)
  • 1/4 cup diced bell peppers (optional)
  • 1/4 cup sliced mushrooms (optional)
  • 1 tsp Italian seasoning

For Topping:

  • 1/4 cup extra mozzarella cheese
  • Fresh basil or parsley (optional, for garnish)

Instructions

  1. Preheat Oven
    • Preheat your oven to 375°F (190°C).
    • Grease a 12-cup muffin tin with cooking spray or line with silicone muffin liners.
  2. Prepare the Crust
    • In a medium bowl, whisk together almond flour, protein powder, baking powder, garlic powder, onion powder, and salt.
    • Add the egg, olive oil, and almond milk. Mix until it forms a thick, slightly sticky dough. Add a little more milk if too dry.
  3. Assemble Base in Muffin Cups
    • Divide dough evenly among muffin cups.
    • Press dough into the bottom and up the sides, forming a cup shape for your “pizza crust.”
  4. Add Filling
    • Spoon 1–2 tbsp marinara sauce into each crust.
    • Top with diced chicken or turkey pepperoni, bell peppers, mushrooms, and 1 tbsp mozzarella cheese.
    • Sprinkle Italian seasoning on top for flavor.
  5. Bake
    • Bake in the preheated oven for 15–18 minutes until the crust is lightly golden and cooked through.
  6. Add Topping
    • Remove from oven, sprinkle additional mozzarella cheese on top, and bake another 3–5 minutes until cheese melts and is slightly bubbly.
  7. Cool and Serve
    • Let cupcakes cool for 5 minutes in the pan before removing.
    • Garnish with fresh basil or parsley if desired.

Nutrition Estimate (per cupcake, 12 servings)

  • Calories: ~180 kcal
  • Protein: ~15g
  • Fat: ~10g
  • Carbs: ~7g (mostly from almond flour and vegetables)

Pro Tips

  • Use high-protein cheese or add extra egg whites in the crust for more protein.
  • Swap marinara sauce for low-sugar, high-protein tomato sauce to reduce carbs.
  • Perfect for meal prep—store in fridge up to 4 days or freeze for longer.

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